Repli-Seq data

Cluster location: /workspace/nobackup/repliseq

Description

Repli-seq data downloaded from http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwRepliSeq/

Contents

bigWig files of areas of replication timing across the genome

Reference genome: hg19

References

See: http://genome.ucsc.edu/cgi-bin/hgFileUi?db=hg19&g=wgEncodeUwRepliSeq

Hansen RS, Thomas S, Sandstrom R, Canfield TK, Thurman RE, Weaver M, Dorschner MO, Gartler SM, Stamatoyannopoulos JA. Sequencing newly replicated DNA reveals widespread plasticity in human replication timing. Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):139-44. https://doi.org/10.1073/pnas.0912402107

Thurman RE, Day N, Noble WS, Stamatoyannopoulos JA. Identification of higher-order functional domains in the human ENCODE regions. Genome Res. 2007 Jun;17(6):917-27. https://doi.org/10.1101/gr.6081407

Author

Axel Rosendahl Huber - 16-03-2023