Pediatric Rhabdoid cohort¶
Description¶
This cohort is a collection of 27 normal-matched WGS from 18 patients from Sant Joan de Déu Hospital.
This is a collaboration with Alexandra Avgustinova.
Some patients have 2 tumor samples: pt1, pt3, pt4, pt5, pt6, pt9, pt14, pt18; the rest have 1 tumor sample.
Some samples are of low/bad quality: pt5-t2, pt6-t1, pt9-t1, pt14-t2, pt16
Some samples have been re-sequenced (due to low quality): pt12-t1
Some samples are being re-sequenced (due to low quality): pt5-t2, pt6-t1, pt9-t1, pt14-t2
Original FASTQ files can be found at:
sarek results including bam files can be found at:
oncoanalyser results can be found at:
Reference¶
Mònica Sánchez Guixé