PedcBioPortal¶
Description¶
The PedcBioPortal for Childhood Cancer Genomics is an instance of cBioPortal supporting the curation and pan-cancer integration of public, pediatric cancer genomics data sets as well as 'open science' initiatives integrated within the Kids First Data Resource Center as well as data from consortia-based efforts including the Children's Brain Tumor Tissue Consortium (CBTTC), the Pediatric NeuroOncology Consortium (PNOC), the St. Baldrick Pediatric Stand Up 2 Cancer Dream Team, and the Pediatric Preclinical Testing Consortium (PPTC).
Data access¶
It is necessary to log in with a google account.
Citing in Publications and Presentations¶
(This text is extracted from the FAQs page of cBioPortal)
Please cite the following portal papers:
- Cerami et al. The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data. Cancer Discovery. May 2012 2; 401. PubMed.
- Gao et al. Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal. Sci. Signal. 6, pl1 (2013). PubMed.
- de Bruijn et al. Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal. Cancer Res (2023). PubMed.
Remember also to cite the source of the data if you are using a publicly available dataset.
Reference¶
- Paula Gomis
- Monica Sanchez