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CGCI

Description

These are WGS datasets from The Cancer Genome Characterization Initiative (CGCI) from NIH.
Webpage: https://www.cancer.gov/ccg/research/genome-sequencing/cgci/

These datasets are: - Burkitt Lymphoma Genome Sequencing Project (BLGSP) - HIV+ Tumor Molecular Characterization Project: Cervical Cancer

They are downloaded from Genomics Data Commons (GDC) and stored at:

/data/bbg/datasets/intogen/input/data/genomes/gdc/cgci/
They are included in intOGen 2023 and 2024: CGCI_WGS_BL_2020 CGCI_WGS_CESC_2020

We have granted access to these datasets (phs000235, data agreement code: 26799 )

Reference

Mònica Sánchez Guixé
Paula Gomis